py-droplets
latest
Installation
Installing from source
Prerequisites
Downloading the package
Getting started
Examples
Basic droplets
Plotting emulsions
Analyze images
Contributing code
Structure of the package
Extending functionality
Coding style
Running unit tests
droplets package
Subpackages
droplets.tools package
droplets.tools.spherical module
droplets.droplet_tracks module
droplets.droplets module
droplets.emulsions module
droplets.image_analysis module
droplets.trackers module
py-droplets
Index
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Index
A
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B
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C
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D
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E
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F
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G
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H
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I
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L
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M
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O
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P
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R
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S
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T
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V
A
append() (DropletTrack method)
(Emulsion method)
(EmulsionTimeCourse method)
B
bbox (Emulsion property)
(SphericalDroplet property)
C
check_data() (PerturbedDroplet3DAxisSym method)
(SphericalDroplet method)
clear() (EmulsionTimeCourse method)
copy() (Emulsion method)
D
data (DiffuseDroplet attribute)
(DropletTrack property)
(DropletTracker attribute)
(Emulsion property)
(PerturbedDroplet2D attribute)
(PerturbedDroplet3D attribute)
(PerturbedDroplet3DAxisSym attribute)
(SphericalDroplet attribute)
data_bounds (DiffuseDroplet property)
(SphericalDroplet property)
DiffuseDroplet (class in droplets.droplets)
dim (DropletTrack property)
(Emulsion property)
(PerturbedDroplet2D attribute)
(PerturbedDroplet3D attribute)
(PerturbedDroplet3DAxisSym attribute)
(SphericalDroplet property)
droplets
module
droplets.droplet_tracks
module
droplets.droplets
module
droplets.emulsions
module
droplets.image_analysis
module
droplets.tools
module
droplets.tools.spherical
module
droplets.trackers
module
DropletTrack (class in droplets.droplet_tracks)
DropletTracker (class in droplets.trackers)
DropletTrackList (class in droplets.droplet_tracks)
duration (DropletTrack property)
E
empty() (Emulsion class method)
Emulsion (class in droplets.emulsions)
EmulsionTimeCourse (class in droplets.emulsions)
end (DropletTrack property)
environment variable
PYTHONPATH
extend() (Emulsion method)
F
finalize() (DropletTracker method)
(LengthScaleTracker method)
first (DropletTrack property)
from_emulsion_time_course() (DropletTrackList class method)
from_file() (DropletTrack class method)
(DropletTrackList class method)
(Emulsion class method)
(EmulsionTimeCourse class method)
from_random() (Emulsion class method)
from_storage() (DropletTrackList class method)
(EmulsionTimeCourse class method)
from_volume() (SphericalDroplet class method)
G
get_dtype() (DiffuseDroplet class method)
(SphericalDroplet class method)
get_emulsion() (EmulsionTimeCourse method)
get_length_scale() (in module droplets.image_analysis)
get_linked_data() (Emulsion method)
get_neighbor_distances() (Emulsion method)
get_pairwise_distances() (Emulsion method)
get_phase_field() (SphericalDroplet method)
get_phasefield() (Emulsion method)
get_position() (DropletTrack method)
get_radii() (DropletTrack method)
get_size_statistics() (Emulsion method)
get_structure_factor() (in module droplets.image_analysis)
get_trajectory() (DropletTrack method)
get_triangulation() (SphericalDroplet method)
get_volumes() (DropletTrack method)
H
handle() (DropletTracker method)
(LengthScaleTracker method)
I
interface_curvature (SphericalDroplet property)
interface_curvature() (PerturbedDroplet2D method)
(PerturbedDroplet3D method)
(PerturbedDroplet3DAxisSym method)
interface_distance() (PerturbedDroplet2D method)
(PerturbedDroplet3D method)
(PerturbedDroplet3DAxisSym method)
interface_position() (PerturbedDroplet2D method)
(PerturbedDroplet3D method)
(SphericalDroplet method)
interface_width (DiffuseDroplet property)
(Emulsion property)
items() (DropletTrack method)
(EmulsionTimeCourse method)
L
last (DropletTrack property)
length_scales (LengthScaleTracker attribute)
LengthScaleTracker (class in droplets.trackers)
locate_droplets() (in module droplets.image_analysis)
M
make_radius_from_volume_compiled() (in module droplets.tools.spherical)
make_radius_from_volume_nd_compiled() (in module droplets.tools.spherical)
make_surface_from_radius_compiled() (in module droplets.tools.spherical)
make_volume_from_radius_compiled() (in module droplets.tools.spherical)
make_volume_from_radius_nd_compiled() (in module droplets.tools.spherical)
module
droplets
droplets.droplet_tracks
droplets.droplets
droplets.emulsions
droplets.image_analysis
droplets.tools
droplets.tools.spherical
droplets.trackers
O
overlaps() (SphericalDroplet method)
P
PerturbedDroplet2D (class in droplets.droplets)
PerturbedDroplet3D (class in droplets.droplets)
PerturbedDroplet3DAxisSym (class in droplets.droplets)
plot() (DropletTrack method)
(DropletTrackList method)
(Emulsion method)
(SphericalDroplet method)
plot_positions() (DropletTrack method)
(DropletTrackList method)
points_cartesian_to_spherical() (in module droplets.tools.spherical)
points_spherical_to_cartesian() (in module droplets.tools.spherical)
polar_coordinates() (in module droplets.tools.spherical)
position (SphericalDroplet property)
PYTHONPATH
R
radius (SphericalDroplet property)
radius_from_surface() (in module droplets.tools.spherical)
radius_from_volume() (in module droplets.tools.spherical)
refine_droplet() (in module droplets.image_analysis)
remove_overlapping() (Emulsion method)
remove_short_tracks() (DropletTrackList method)
remove_small() (Emulsion method)
S
spherical_harmonic_real() (in module droplets.tools.spherical)
spherical_harmonic_real_k() (in module droplets.tools.spherical)
spherical_harmonic_symmetric() (in module droplets.tools.spherical)
spherical_index_count() (in module droplets.tools.spherical)
spherical_index_count_optimal() (in module droplets.tools.spherical)
spherical_index_k() (in module droplets.tools.spherical)
spherical_index_lm() (in module droplets.tools.spherical)
SphericalDroplet (class in droplets.droplets)
start (DropletTrack property)
surface_area (PerturbedDroplet2D property)
(SphericalDroplet property)
surface_area_approx (PerturbedDroplet2D property)
surface_from_radius() (in module droplets.tools.spherical)
T
threshold_otsu() (in module droplets.image_analysis)
time_overlaps() (DropletTrack method)
times (LengthScaleTracker attribute)
to_file() (DropletTrack method)
(DropletTrackList method)
(Emulsion method)
(EmulsionTimeCourse method)
total_droplet_volume (Emulsion property)
tracker() (EmulsionTimeCourse method)
V
volume (PerturbedDroplet2D property)
(PerturbedDroplet3D property)
(SphericalDroplet property)
volume_approx (PerturbedDroplet3D property)
(PerturbedDroplet3DAxisSym property)
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